RNAseq Data Analysis by "RNAlysis" (macOS & Windows programme)

RNAlysis is a programme that uses a series of Python scripts to do its work. This has the advantage that it can bind in a lot of pre-existing tools. It has the disadvantage that it is not so well managed as a self-containing programme. When it fails it sometimes helps to quit the programme and do the last step again.

- Source & Documentation , Original Tutorial (will be used in this guideline) and Complete Handbook from Guy Teichman

- Installation : Windows - macOS

- Running RNAlysis

- Example Data

- Sequence Quality

- Trimming RNAseq Data

- Quantifying RNAseq Data

- Analysing the expression difference between two experimental situations

Comments: matthias.wilm@ucd.ie

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